Pulling with Singularity leads to "proxyconnect tcp: EOF"
I’m trying to use the singularity by pulling some existing image like: singularity pull docker://ubuntu singularity pull shub://vsoch/hello-world But they
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slurm srun with singularity does not number MPI ranks correctly
I have a simple Fortran program that prints the number of ranks and the rank to the screen for each
Continue readingPorting docker build commands to Singularity
docker build –tag gcr.io/fuzzbench/runners/afl/libpng-1.2.56-intermediate –build-arg BUILDKIT_INLINE_CACHE=1 –cache-from gcr.io/fuzzbench/runners/afl/libpng-1.2.56-intermediate –file fuzzers/afl/runner.Dockerfile fuzzers/afl I want to port this to a Singularity build
Continue readingFile exists in Singularity container but produces No such file error upon exec
Despite being able to see a file within a container I’m not able to find it on Singularity -s exec.
Continue readingWhy is docker enforcing pull rate limit for a singularity build?
I am trying to understand how the docker pull rate limit is enforced. I am doing the following: singularity build
Continue readingMPI program running within a Singularity container on a cluster
I am trying to run an MPI application through a singularity container on a cluster and testing first a simple
Continue readingdifference between working directory of docker and singularity
I have a very basic question about docker and singularity. I’d like to be able to run a docker container
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How to refer to files from other directories while running a docker image?
I tried to run a program SAIGE-GENE using docker image. After using docker pull with docker pull wzhou88/saige:0.43.2 I was
Continue readingRun singularity docker in cluster
for a sientific projet I need to use the singularity project here : https://github.com/Dfam-consortium/TETools I manage to run it by
Continue readingBuild Singularity container using GitLab CI
I want to build a singularity image in GitLab CI. Unfortunately, the official containers fail with: Running with gitlab-runner 13.5.0
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